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Genetic Archaeology
GENETIC ARCHAEOLOGY // PROFILE

HFE

Homeostatic Iron Regulator

CHR 6
6p22.2

Overview

The HFE gene regulates iron absorption from food. Mutations can lead to excessive iron storage in the body, which, if untreated, results in tissue damage.

📍 Chromosomal Position

6p22.2 (Chromosome 6)

🧬 Gene Category

Hereditary Diseases / Metabolism

🔬 Inheritance

Autosomal recessive

📊 Prevalence

C282Y carrier frequency approx. 1:10 (Northern Europe)

Function & Significance

The HFE protein interacts with transferrin receptors on the cell surface to control the amount of iron absorbed into cells (particularly in the liver and intestine).

When certain mutations are present, the protein loses its regulatory function. The body “thinks” it is suffering from an iron deficiency and absorbs iron from food uncontrollably, which then deposits in the organs.

🔬 The C282Y Mutation

The C282Y mutation (rs1800562) is the most clinically significant variant. Nearly 90% of all patients with classical hemochromatosis are homozygous (carry two copies) for this mutation.

Associated Diseases

  • 🩸 Hereditary Hemochromatosis

    Iron storage disease Type 1

  • 🌳 Liver Cirrhosis

    Long-term consequence of massive iron deposition

  • 🍯 Bronze Diabetes

    Combination of skin discoloration and diabetes due to pancreatic damage

🧬 Relevant SNPs

rs1800562
6:26092913
Allele 1

G

/

Allele 2

A

Significance: C282Y – AA genotype leads to a very high risk of iron overload.

rs1799945
6:26091179
Allele 1

C

/

Allele 2

G

Significance: H63D – Moderately increases risk, usually only clinically relevant in combination with C282Y.

⚕️ Clinical Recommendation

If risk genotypes are detected, ferritin levels and transferrin saturation in the blood should be measured regularly. Early treatment through phlebotomy (bloodletting) can completely prevent organ damage.

📚 Data Sources

  • OMIM: #235200 (Hemochromatosis)
  • dbSNP: rs1800562, rs1799945
  • ClinVar: Pathogenic HFE variants
  • PubMed: Literature on iron homeostasis

Biological Function

The HFE protein interacts with transferrin receptors to control iron uptake into cells. The C282Y mutation is the main cause of hereditary hemochromatosis.

Associated Conditions

Hereditary Hemochromatosis Cirrhosis (in iron overload) Bronze Diabetes
Molecular Analysis

Analyzed Markers

rs1800562 Pathogenic
Pos: 6:26092913 | Alleles: G/A

C282Y - Main mutation; AA (homozygous) often leads to clinical hemochromatosis.

rs1799945 Pathogenic (Moderate)
Pos: 6:26091179 | Alleles: C/G

H63D - Moderate risk, especially combined with C282Y.

rs1800730 Pathogenic (Minor)
Pos: 6:26091234 | Alleles: A/T

S65C - Rarer variant, minor clinical effect.