G
Genetic Archaeology
GENETIC ARCHAEOLOGY // PROFILE

CCR5

C-C Motif Chemokine Receptor 5

CHR 3
3p21.31

Overview

CCR5 encodes a receptor on the surface of white blood cells (specifically T cells). This receptor regulates the migration of immune cells into inflamed tissue. It became famous primarily because it serves as a co-receptor that HIV viruses require to enter human cells.

📍 Chromosomal Position

3p21.31 (Chromosome 3)

🧬 Gene Category

Immune System

🔬 Inheritance

Autosomal recessive (for resistance)

📊 Prevalence (Delta32)

~1% of Europeans are homozygous (resistant)

Function & Significance

The CCR5 receptor is a chemokine receptor that receives signals to guide immune cells to sites of inflammation. While it plays an important role in defending against certain infections, many HIV strains (R5-tropic) use it as an “anchor point” to attach to the cell.

💡 The Delta32 Mutation

Approximately 1,000 to 3,000 years ago, a mutation emerged in Northern Europe: a deletion of 32 base pairs in the CCR5 gene. People who have two copies of this mutation (homozygous) do not form a functional CCR5 receptor on the cell surface and are therefore largely resistant to HIV infection.

🧬 Relevant SNP: rs333

This famous SNP (actually an InDel variant) describes the CCR5-Delta32 mutation:

rs333 (Delta32)
3:46373452
Allele 1 (I)

Normal

/

Allele 2 (D)

Delta32

Interpretation:
I/I: Normal CCR5 expression. Normal risk of HIV infection.
I/D: Partial protection. The disease progression in AIDS can be significantly slowed down.
D/D: Complete “knockout” of the receptor. Widespread resistance to common HIV strains.

⚠️ Other Risks

Resistance to HIV comes at a price: carriers of the Delta32 mutation have a slightly increased risk for severe cases of West Nile Virus and TBE (Tick-borne encephalitis), as the CCR5 receptor is needed for the defense against these viruses in the brain.

📚 Data Sources

  • OMIM: #601373 – Chemokine, CC Motif, Receptor 5; CCR5
  • dbSNP: rs333
  • PubMed: “CCR5-delta32 and HIV resistance”

Biological Function

The CCR5 receptor plays a role in inflammatory reactions by binding chemokines. It is famous because certain mutations can block HIV-1 entry into host cells.

Associated Conditions

HIV Resistance (Delta32) West Nile Virus (increased risk with defect) Tick-borne Encephalitis Chronic Inflammation
Molecular Analysis

Analyzed Markers

rs333 Protective
Pos: 3:46373452 | Alleles: D/I

Delta32 (32-bp Deletion) - Carriers of two deletion alleles (D/D) are largely resistant to infection with R5-tropic HIV-1 strains. Heterozygous carriers often have a slower disease progression.